peakref Variable Names

See the glossary page for information on the axes systems.

n1 and n2 control the printing of the value of a variable: n1 is the total length, n2 is the length of the decimal part. n1 and n2 can be changed with precision.
General
Name n1 n2 Explanation
xtalx 95 crystal shift along x-axis
xtaly 95 crystal shift along y-axis
xtalz 95 crystal shift along z-axis
zerodist 105 detector distance
zerohor 95 detector horizontal shift
zerover 95 detector vertical shift
detrotx 93 detector rotation around x-axis
detroty 93 detector rotation around y-axis
detrotz 93 detector rotation around z-axis
Alias Variables
all all
xtal xtalx xtaly xtalz
detzero zerodist zerohor zerover
detrox detrotx detroty detrotz
First Matrix
Name n1 n2 Explanation
a 105 a axis length
b 105 b axis length
c 105 c axis length
alpha 83 angle between b and c
beta 83 angle between a and c
gamma 83 angle between a and b
orx 95 x component orientation vector
ory 95 y component orientation vector
ora 93 orientation angle
Alias Variables
axes a b c
angles alpha beta gamma
cell a b c alpha beta gamma
orient orx ory ora
rmat a b c alpha beta gamma orx ory ora
Multiple Matrices
Name n1 n2 Explanation
a2 105 a axis length
b2 105 b axis length
c2 105 c axis length
alpha2 83 angle between b2 and c2
beta2 83 angle between a2 and c2
gamma2 83 angle between a2 and b2
orx2 95 x component orientation vector
ory2 95 y component orientation vector
ora2 93 orientation angle
a3 105 a axis length
b3 105 b axis length
c3 105 c axis length
alpha3 83 angle between b3 and c3
beta3 83 angle between a3 and c3
gamma3 83 angle between a3 and b3
orx3 95 x component orientation vector
ory3 95 y component orientation vector
ora3 93 orientation angle
...    etc
Alias Variables
axes2 a2 b2 c2
angles2 alpha2 beta2 gamma2
cell2 a2 b2 c2 alpha2 beta2 gamma2
orient2 orx2 ory2 ora2
rmat2 a2 b2 c2 alpha2 beta2 gamma2 orx2 ory2 ora2
axes3 a3 b3 c3
angles3 alpha3 beta3 gamma3
cell3 a3 b3 c3 alpha3 beta3 gamma3
orient3 orx3 ory3 ora3
rmat3 a3 b3 c3 alpha3 beta3 gamma3 orx3 ory3 ora3
... etc
Qvectors
Name n1 n2 Explanation
qvx 84 h component qvector
qvy 84 k component qvector
qvz 84 l component qvector
qvx2 84 h component qvector
qvy2 84 k component qvector
qvz2 84 l component qvector
qvx3 84 h component qvector
qvy3 84 k component qvector
qvz3 84 l component qvector
...    etc
Alias Variables
qvec qvx1 qvy1 qvz1
qvec2 qvx2 qvy2 qvz2
... etc
Intensity scale
Name n1 n2 Explanation
bfactor 95 bfactor
imscale 95 image scale factor
 
Stills
Name n1 n2 Explanation
flex 95 eta/theta factor
gauss1 95 gaussian parameter for partiality calculation
gauss2 95 gaussian parameter for partiality calculation
gauss3 95 gaussian parameter for partiality calculation
gauss4 95 gaussian parameter for partiality calculation
Alias Variables
gauss gauss1 gauss2 gauss3 gauss4
Free variables
Name n1 n2 Explanation
fvar1 84 free variable 1
fvar2 84 free variable 2
...    etc
fvar10 84 free variable 10
 
Expert 1
Name n1 n2 Explanation
focusdist 93 focus distance
focushor 94 focus horizontal offset
focusver 94 focus vertical offset
gonio1 93 goniostat omega offset
gonio2 93 goniostat kappa or chi offset
gonio3 93 goniostat phi offset
 
Expert 2
Name n1 n2 Explanation
rotax000x 95 x-coordinate rotax (all angles 0)
rotax000y 95 y-coordinate rotax (all angles 0)
rotax000z 95 z-coordinate rotax (all angles 0)
omx 95 x-coordinate omega axis
omy 95 y-coordinate omega axis
omz 95 z-coordinate omega axis
kchx 95 x-coordinate kappa/chi axis (omega=0)
kchy 95 y-coordinate kappa/chi axis (omega=0)
kchz 95 z-coordinate kappa/chi axis (omega=0)
phx 95 x-coordinate phi axis (omega=0, kappa/chi=0)
kchy 95 y-coordinate phi axis (omega=0, kappa/chi=0)
kchz 95 z-coordinate phi axis (omega=0, kappa/chi=0)
swing 93 detector swing offset
swingx 95 x-coordinate swing axis
swingy 95 y-coordinate swing axis
swingz 95 z-coordinate swing axis
lambda 85 radiation wavelength
 
remarks
Use nop to mark the end of a list of variables
Use a single wildcharacter (*) to select multiple variables
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